Structure of PDB 8ine Chain R

Receptor sequence
>8ineR (length=153) Species: 9606 (Homo sapiens) [Search protein sequence]
KVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQNHLDP
QKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIK
QTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICAN
DAI
3D structure
PDB8ine Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
ChainR
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna R K15 H18 R22 K23 R29 K33 K37 N42 A45 D100 R101 Q102 R105 S108 N136 K1 H4 R8 K9 R15 K19 K23 N28 A31 D86 R87 Q88 R91 S94 N122
BS02 rna R R29 H32 R47 K151 P154 N155 R15 H18 R33 K137 P140 N141
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:1990275 preribosome binding
Biological Process
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ine, PDBe:8ine, PDBj:8ine
PDBsum8ine
PubMed37491604
UniProtQ96EY4|TMA16_HUMAN Translation machinery-associated protein 16 (Gene Name=TMA16)

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