Structure of PDB 8ced Chain R

Receptor sequence
>8cedR (length=78) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
SLKKGPFVDGHLMTKIEKLNETDKKQVVKTWSRRSTIFPQFIGHTIAVYD
GRKHVPVFISEDMVGHKLGEFAPTRTYK
3D structure
PDB8ced Structural basis of ribosomal 30S subunit degradation by RNase R
ChainR
Resolution4.15 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna R S4 L5 K6 F10 H14 K18 W34 R36 R37 Y52 G54 R55 K70 G72 E73 T77 R78 T79 Y80 S1 L2 K3 F7 H11 K15 W31 R33 R34 Y49 G51 R52 K67 G69 E70 T74 R75 T76 Y77
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ced, PDBe:8ced, PDBj:8ced
PDBsum8ced
PubMed38326618
UniProtP21476|RS19_BACSU Small ribosomal subunit protein uS19 (Gene Name=rpsS)

[Back to BioLiP]