Structure of PDB 7rl5 Chain R

Receptor sequence
>7rl5R (length=559) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
MKYVVVSGGVISGIGKGVLASSTGMLLKTLGLKVTSIKIDPYMNIDAGTM
SPLEHGECFVLDDGGETDLDLGNYERYLGITLSRDHNITTGKIYSHVISR
ERRGDYLGKTVQIVPHLTNAIQDWIQRVSKIPVDDTGLEPDVCIIELGGT
VGDIESAPFVEALRQFQFEVGRENFALIHVSLVPVIHGEQKTKPTQAAIK
DLRSLGLIPDMIACRCSEELNRSTIDKIAMFCHVGPEQVVNVHDVNSTYH
VPLLLLKQHMIDYLHSRLKLGEVPLTLEDKERGSQLLTNWENMTKNLDDS
DDVVKIALVGKYTNLKDSYLSVTKSLEHASMKCRRQLEILWVEASNLEPE
TQEVDKNKFHDSWNKLSSADGILVPGGFGTRGIEGMILAAKWARESGVPF
LGVCLGLQVAAIEFARNVIGRPNSSSTEFLDETLLAPEDQVVITMRLGLR
PTIFQPNSEWSNIRKLYGEVNEVHERHRHRYEINPKIVNDMESRGFIFVG
KDETGQRCEIFELKGHPYYVGTQYHPEYTSKVLEPSRPFWGLVAAASGTL
GEVIKDINL
3D structure
PDB7rl5 Cryo-EM structures of CTP synthase filaments reveal mechanism of pH-sensitive assembly during budding yeast starvation.
ChainR
Resolution3.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 6.3.4.2: CTP synthase (glutamine hydrolyzing).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CTP R Q112 E161 Q112 E161
BS02 CTP R K191 T192 K191 T192
BS03 CTP R K16 G17 V18 Y77 K324 K16 G17 V18 Y77 K324
BS04 CTP R S12 D153 I154 E155 S12 D153 I154 E155
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 13:32:14 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7rl5', asym_id = 'R', title = 'Cryo-EM structures of CTP synthase filaments rev...nsitive assembly during budding yeast starvation.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7rl5', asym_id='R', title='Cryo-EM structures of CTP synthase filaments rev...nsitive assembly during budding yeast starvation.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003883,0006221,0006241', uniprot = '', pdbid = '7rl5', asym_id = 'R'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003883,0006221,0006241', uniprot='', pdbid='7rl5', asym_id='R')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>