Structure of PDB 6j2c Chain R

Receptor sequence
>6j2cR (length=400) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
NYEVSEKAFLLTQSKVSIEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLV
NNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEE
DDEGELEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVML
TIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR
NFKEAAKLLVDSLATFTSIELTSYESIATYASVTGLFTLERTDLKSKVID
SPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYL
NRHADFFVREMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFI
PNKQLNCVIDRVNGIVETNRPDNKNAQYHLLVKQGDGLLTKLQKYGAAVR
3D structure
PDB6j2c Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.
ChainR
Resolution7.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide R A302 F305 P306 L309 F328 R331 R334 S355 G358 V359 F363 N366 D367 K370 N374 A280 F283 P284 L287 F306 R309 R312 S333 G336 V337 F341 N344 D345 K348 N352
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0005515 protein binding
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Cellular Component
GO:0000502 proteasome complex
GO:0005634 nucleus
GO:0005838 proteasome regulatory particle
GO:0008541 proteasome regulatory particle, lid subcomplex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6j2c, PDBe:6j2c, PDBj:6j2c
PDBsum6j2c
PubMed30792173
UniProtQ06103|RPN7_YEAST 26S proteasome regulatory subunit RPN7 (Gene Name=RPN7)

[Back to BioLiP]