Structure of PDB 6epf Chain R

Receptor sequence
>6epfR (length=389) Species: 10116 (Rattus norvegicus) [Search protein sequence]
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDTAVREELMAAVRENNM
APYYEALCKSLDWQMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEI
RDAMMAKAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLF
YMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAEL
FLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL
HSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKV
NEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
3D structure
PDB6epf In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment.
ChainR
Resolution11.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide R F272 Q273 A276 E279 Q280 Y292 R293 V296 R297 R300 G317 Y318 E321 G324 V325 V327 F329 E333 F272 Q273 A276 E279 Q280 Y292 R293 V296 R297 R300 G317 Y318 E321 G324 V325 V327 F329 E333
Gene Ontology
Biological Process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Cellular Component
GO:0000502 proteasome complex
GO:0005838 proteasome regulatory particle
GO:0022624 proteasome accessory complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6epf, PDBe:6epf, PDBj:6epf
PDBsum6epf
PubMed29398115
UniProtQ6PCT9

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