Structure of PDB 6epd Chain R

Receptor sequence
>6epdR (length=389) Species: 10116 (Rattus norvegicus) [Search protein sequence]
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDTAVREELMAAVRENNM
APYYEALCKSLDWQMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEI
RDAMMAKAEYLCQIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLF
YMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAEL
FLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVL
HSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKV
NEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
3D structure
PDB6epd In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment.
ChainR
Resolution15.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide R P15 S269 F272 Q273 K284 Y292 R293 V296 R297 R300 A320 E321 F323 G324 V325 F329 E333 R336 P15 S269 F272 Q273 K284 Y292 R293 V296 R297 R300 A320 E321 F323 G324 V325 F329 E333 R336
Gene Ontology
Biological Process
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Cellular Component
GO:0000502 proteasome complex
GO:0005838 proteasome regulatory particle
GO:0022624 proteasome accessory complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6epd, PDBe:6epd, PDBj:6epd
PDBsum6epd
PubMed29398115
UniProtQ6PCT9

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