Structure of PDB 5yq7 Chain R
Receptor sequence
>5yq7R (length=36) Species:
120962
(Roseiflexus castenholzii) [
Search protein sequence
]
PFEFRTSVVVSTLLGLVMALLIHFVVLSSGAFNWLR
3D structure
PDB
5yq7
Cryo-EM structure of the RC-LH core complex from an early branching photosynthetic prokaryote.
Chain
R
Resolution
4.1 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
KGD
R
L24 H27
L20 H23
BS02
BCL
R
I26 H27
I22 H23
BS03
KGD
R
L18 G19 M22
L14 G15 M18
BS04
BCL
R
T16 H27 W38
T12 H23 W34
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0019866
organelle inner membrane
GO:0030076
light-harvesting complex
GO:0030077
plasma membrane light-harvesting complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5yq7
,
PDBe:5yq7
,
PDBj:5yq7
PDBsum
5yq7
PubMed
29674684
UniProt
Q83XD1
[
Back to BioLiP
]