Structure of PDB 5nrg Chain R

Receptor sequence
>5nrgR (length=102) Species: 93061 (Staphylococcus aureus subsp. aureus NCTC 8325) [Search protein sequence]
IKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNP
EGGILETEAAIHVSNVQLLDPKTNEPTRVGYKFVDGKKVRIAKKSGEEIK
SN
3D structure
PDB5nrg Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.
ChainR
Resolution3.442 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna R D7 K15 D16 L27 K42 K43 Q45 G55 R80 V81 D5 K13 D14 L25 K40 K41 Q43 G53 R78 V79
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5nrg, PDBe:5nrg, PDBj:5nrg
PDBsum5nrg
PubMed28973455
UniProtQ2FW17|RL24_STAA8 Large ribosomal subunit protein uL24 (Gene Name=rplX)

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