Structure of PDB 3jbu Chain R
Receptor sequence
>3jbuR (length=55) Species:
83333
(Escherichia coli K-12) [
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EIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLP
YTDRH
3D structure
PDB
3jbu
Mechanisms of ribosome stalling by SecM at multiple elongation steps
Chain
R
Resolution
3.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
R
K37 I38 P40 S41 K49 R52 R56 K59 R60 R62 Y63 Y69 T70
K19 I20 P22 S23 K31 R34 R38 K41 R42 R44 Y45 Y51 T52
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0005515
protein binding
GO:0019843
rRNA binding
GO:0048027
mRNA 5'-UTR binding
GO:0070181
small ribosomal subunit rRNA binding
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3jbu
,
PDBe:3jbu
,
PDBj:3jbu
PDBsum
3jbu
PubMed
26670735
UniProt
P0A7T7
|RS18_ECOLI Small ribosomal subunit protein bS18 (Gene Name=rpsR)
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