Structure of PDB 8pfr Chain QV

Receptor sequence
>8pfrQV (length=136) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SGNGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPA
ASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGV
IANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV
3D structure
PDB8pfr Real-space refinement in PHENIX for cryo-EM and crystallography.
ChainQV
Resolution2.15 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna QV G8 K10 F11 R12 S14 G16 P18 A21 I22 I37 K40 G41 S42 S44 R45 L46 N47 R48 L49 T61 K63 K71 V73 K83 F92 G7 K9 F10 R11 S13 G15 P17 A20 I21 I36 K39 G40 S41 S43 R44 L45 N46 R47 L48 T60 K62 K70 V72 K82 F91
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pfr, PDBe:8pfr, PDBj:8pfr
PDBsum8pfr
PubMed
UniProtP0CX41|RL23A_YEAST Large ribosomal subunit protein uL14A (Gene Name=RPL23A)

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