Structure of PDB 1vvj Chain QB

Receptor sequence
>1vvjQB (length=237) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
EITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELER
TFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLT
NFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFR
LLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPG
NDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ
3D structure
PDB1vvj Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
ChainQB
Resolution3.44 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna QB W24 P26 R96 G99 G100 T103 N104 R111 K133 E176 K179 W21 P23 R93 G96 G97 T100 N101 R108 K130 E173 K176
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1vvj, PDBe:1vvj, PDBj:1vvj
PDBsum1vvj
PubMed25128388
UniProtP80371|RS2_THET8 Small ribosomal subunit protein uS2 (Gene Name=rpsB)

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