Structure of PDB 5lyb Chain Q0
Receptor sequence
>5lybQ0 (length=52) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
]
IIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCGHTNQLRPKKK
LK
3D structure
PDB
5lyb
?
Chain
Q0
Resolution
3.25 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
Q0
V95 R97 Y100 A101 R102 P104 R106 T108 N109 R111 K112 R113 K114 G116 H117 R122 K124 K125
V19 R21 Y24 A25 R26 P28 R30 T32 N33 R35 K36 R37 K38 G40 H41 R46 K48 K49
BS02
MG
Q0
C99 K114
C23 K38
BS03
MG
Q0
R102 L103 P104
R26 L27 P28
BS04
ZN
Q0
C96 C110 C115
C20 C34 C39
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5lyb
,
PDBe:5lyb
,
PDBj:5lyb
PDBsum
5lyb
PubMed
27827794
UniProt
P0CH08
|RL40A_YEAST Ubiquitin-ribosomal protein eL40A fusion protein (Gene Name=RPL40A)
[
Back to BioLiP
]