Structure of PDB 8xlp Chain Q
Receptor sequence
>8xlpQ (length=163) Species:
52970
(Rhodomonas salina) [
Search protein sequence
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RPPGLDGTYVGDIGFDPLGFSSIIDMRWLREAELKHGRVCMLAATGMIVQ
DVYQFPGVTKSFGDAKMTTLHDVAVKQGSMQQLLVWLGFLEIFGFVAIVQ
MLQGSDRQPGDFGFDPLNCAANPDALARRQLVELKNGRLAMIATAGMLHH
FFITGKGPIQLIT
3D structure
PDB
8xlp
Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina
Chain
Q
Resolution
2.57 Å
3D
structure
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Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CLA
Q
L57 G63 D64 I65 D68 F72 L81 R82 E85 R190 M193
L5 G11 D12 I13 D16 F20 L29 R30 E33 R138 M141
BS02
CLA
Q
F72 I76 W80 L81 H88
F20 I24 W28 L29 H36
BS03
CLA
Q
L94 A95 G98 V101 Q102 Q106 F107 V110 F114 L122 M132
L42 A43 G46 V49 Q50 Q54 F55 V58 F62 L70 M80
BS04
KC2
Q
F107 G109 V110 S113 F114
F55 G57 V58 S61 F62
BS05
CLA
Q
G130 S131 Q134 L135 W138
G78 S79 Q82 L83 W86
BS06
CLA
Q
H123 V127 M132 Q133 L135
H71 V75 M80 Q81 L83
BS07
CLA
Q
W80 A84 K87 H88 L139 E143 F147
W28 A32 K35 H36 L87 E91 F95
BS08
CLA
Q
R90 M93 D163 F164 F166 L178 R181 Q182 E185 N188
R38 M41 D111 F112 F114 L126 R129 Q130 E133 N136
BS09
KC2
Q
R180 R181 V184 N188 L191
R128 R129 V132 N136 L139
BS10
CLA
Q
I194 G198 H201 H202 I205
I142 G146 H149 H150 I153
BS11
CLA
Q
H201 F204
H149 F152
BS12
II0
Q
M93 T97 F166 D167 P168 L169 A195 P210
M41 T45 F114 D115 P116 L117 A143 P158
BS13
II0
Q
F67 D68 L70 F72 H88 C92 A95 Q102 M119 L122
F15 D16 L18 F20 H36 C40 A43 Q50 M67 L70
BS14
II0
Q
K187 R190 I194
K135 R138 I142
BS15
II0
Q
V91 L94 L135 L139 F164
V39 L42 L83 L87 F112
BS16
IHT
Q
F67 T120 H123 D124 A197 L200 H201
F15 T68 H71 D72 A145 L148 H149
BS17
II0
Q
Q133 Q134 W138
Q81 Q82 W86
BS18
IHT
Q
W138 F141
W86 F89
External links
PDB
RCSB:8xlp
,
PDBe:8xlp
,
PDBj:8xlp
PDBsum
8xlp
PubMed
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