Structure of PDB 8s8f Chain Q

Receptor sequence

>8s8fQ (length=141) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

TVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPL
LLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSK
NELKKAFTSYDRTLLIADSRRPEPKKFGGRGARSRFQKSYR

3D structure

PDB

8s8f Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

3.95 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Q	Q8 T9 F10 K12 K14 S15 K26 L28 Q40 P41 I43 R66 T70 G71 G72 G73 H74 V75 S76 K87 I118 S121 R122 R123 P124 E125 P126 K127 K128 F129 R132 G133 R135 S136 F138 Q139 K140 S141 R143	Q6 T7 F8 K10 K12 S13 K24 L26 Q38 P39 I41 R64 T68 G69 G70 G71 H72 V73 S74 K85 I116 S119 R120 R121 P122 E123 P124 K125 K126 F127 R130 G131 R133 S134 F136 Q137 K138 S139 R141

External links

PDB	RCSB:8s8f, PDBe:8s8f, PDBj:8s8f
PDBsum	8s8f
PubMed	39193907
UniProt	Q875N2\|RS16_KLULA Small ribosomal subunit protein uS9 (Gene Name=RPS16)