Structure of PDB 8rw1 Chain Q

Receptor sequence

>8rw1Q (length=141) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

TVPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPL
LLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSK
NELKKAFTSYDRTLLIADSRRPEPKKFGGRGARSRFQKSYR

3D structure

PDB

8rw1 Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

3.35 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Q	Q8 T9 F10 K12 K14 S15 K30 Q40 E42 R66 K68 G71 G72 G73 H74 V75 S76 Q77 R114 R122 R123 P124 E125 P126 K127 K128 F129 G130 R132 G133 A134 R135 S136 R137 F138 Q139 K140 S141 Y142	Q6 T7 F8 K10 K12 S13 K28 Q38 E40 R64 K66 G69 G70 G71 H72 V73 S74 Q75 R112 R120 R121 P122 E123 P124 K125 K126 F127 G128 R130 G131 A132 R133 S134 R135 F136 Q137 K138 S139 Y140

External links

PDB	RCSB:8rw1, PDBe:8rw1, PDBj:8rw1
PDBsum	8rw1
PubMed	39193907
UniProt	Q875N2\|RS16_KLULA Small ribosomal subunit protein uS9 (Gene Name=RPS16)