Structure of PDB 8pj5 Chain Q

Receptor sequence

>8pj5Q (length=99) Species: 9606 (Homo sapiens) [Search protein sequence]

TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVR
DISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR

3D structure

PDB

8pj5 Structural basis for translational control by the human 48S initiation complex from codon scanning toward subunit joining

Chain

Resolution

2.9 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	Q	V40 R42 N43 K66 R100	V39 R41 N42 K65 R99
BS02	rna	Q	T2 K3 K4 R5 R6 N7 N8 G9 R10 A11 K12 K13 G14 R15 G16 H17 Q19 R28 K32 K34 K37 K38 F39 V75 S76 I79 H80 K82 V83 V84 R85 N86 R87 S88 R89 R92 K93 R95 T96 P97 P98 R100	T1 K2 K3 R4 R5 N6 N7 G8 R9 A10 K11 K12 G13 R14 G15 H16 Q18 R27 K31 K33 K36 K37 F38 V74 S75 I78 H79 K81 V82 V83 R84 N85 R86 S87 R88 R91 K92 R94 T95 P96 P97 R99
BS03	ZN	Q	C26 C74	C25 C73

External links

PDB	RCSB:8pj5, PDBe:8pj5, PDBj:8pj5
PDBsum	8pj5
PubMed
UniProt	P62854\|RS26_HUMAN Small ribosomal subunit protein eS26 (Gene Name=RPS26)