Structure of PDB 8cmj Chain Q

Receptor sequence

>8cmjQ (length=127) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]

ASLPHPKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGNIS
QPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNIS
AKNRVVILARAKALGIKVTNPKGRLAL

3D structure

PDB

8cmj Cryo-EM analysis of eukaryotic ribosome translocation intermediates

Chain

Resolution

3.79 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Q	K8 K11 K12 T14 K15 F17 R19 H21 D23 R24 Y25 H26 R27 N31 R33 K34 G37 I38 D39 S40 R43 R44 R45 F46 R47 G48 N49 I50 P53 K54 I55 G56 Y57 G58 S59 N60 K61 K62 K64 P68 E95 H98 N99 I100 S101 K103 N104 R105 N121 G124 R125	K7 K10 K11 T13 K14 F16 R18 H20 D22 R23 Y24 H25 R26 N30 R32 K33 G36 I37 D38 S39 R42 R43 R44 F45 R46 G47 N48 I49 P52 K53 I54 G55 Y56 G57 S58 N59 K60 K61 K63 P67 E94 H97 N98 I99 S100 K102 N103 R104 N120 G123 R124

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:8cmj, PDBe:8cmj, PDBj:8cmj
PDBsum	8cmj
PubMed	38030725
UniProt	P38061\|RL32_YEAST Large ribosomal subunit protein eL32 (Gene Name=RPL32)