Structure of PDB 5cxt Chain Q

Receptor sequence
>5cxtQ (length=112) Species: 10090 (Mus musculus) [Search protein sequence]
VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDK
YSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPD
SMTATQLLVPSR
3D structure
PDB5cxt UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.
ChainQ
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide Q E445 D449 L491 R494 W495 F496 A497 G498 I501 E28 D32 L74 R77 W78 F79 A80 G81 I84
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0006397 mRNA processing
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5cxt, PDBe:5cxt, PDBj:5cxt
PDBsum5cxt
PubMed27050129
UniProtQ8VH51|RBM39_MOUSE RNA-binding protein 39 (Gene Name=Rbm39)

[Back to BioLiP]