Structure of PDB 8w51 Chain P

Receptor sequence

>8w51P (length=116) Species: 562 (Escherichia coli) [Search protein sequence]

DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF

3D structure

PDB

8w51 Structure basis of translation regulation by YchF bound to ribosome

Chain

Resolution

2.4 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	P	R9 R10 T12 R13 R16 K17 L18 L21 S91 F92 R94 Q98 Y99 R111 F117	R8 R9 T11 R12 R15 K16 L17 L20 S90 F91 R93 Q97 Y98 R110 F116
BS02	rna	P	K3 R15 R25 H29 R30 T31 P32 R33 H34 Y36 Q38 I40 G44 S45 E46 V47 V54 Y64 N67 K68 Q98 H100 G101 R102	K2 R14 R24 H28 R29 T30 P31 R32 H33 Y35 Q37 I39 G43 S44 E45 V46 V53 Y63 N66 K67 Q97 H99 G100 R101

External links

PDB	RCSB:8w51, PDBe:8w51, PDBj:8w51
PDBsum	8w51
PubMed
UniProt	P0C018\|RL18_ECOLI Large ribosomal subunit protein uL18 (Gene Name=rplR)