Structure of PDB 8rdu Chain P

Receptor sequence

>8rduP (length=257) Species: 34078 (Scytonema hofmannii) [Search protein sequence]

EWLQAEIARLKGKSIVPLQQVKTLHDWLDGKRKARKSCRVVGESRTGKTV
ACDAYRYRHKPQQEAGRPPTVPVVYIRPHQKCGPKDLFKKITEYLKYRVT
KGTVSDFRDRTIEVLKGCGVEMLIIDEADRLKPETFADVRDIAEDLGIAV
VLVGTDRLDAVIKRDEQVLERFRAHLRFGKLSGEDFKNTVEMWEQMVLKL
PVSSNLKSKEMLRILTSATEGYIGRLDEILREAAIRSLSRGLKKIDKAVL
QEVAKEY

3D structure

PDB

8rdu Conformational landscape of the type V-K CRISPR-associated transposon integration assembly.

Chain

Resolution

2.3 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	P	K103 T121 V122	K85 T103 V104
BS02	dna	P	K119 R182	K101 R164
BS03	peptide	P	S32 I33 P35 Y75	S14 I15 P17 Y57
BS04	ATP	P	Q185 R189	Q167 R171
BS05	ATP	P	S32 V34 S62 R63 T64 G65 K66 T67 V68 G242 D245	S14 V16 S44 R45 T46 G47 K48 T49 V50 G224 D227

External links

PDB	RCSB:8rdu, PDBe:8rdu, PDBj:8rdu
PDBsum	8rdu
PubMed	38834066
UniProt	A0A8J0PCL3

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