Structure of PDB 8pj1 Chain P

Receptor sequence

>8pj1P (length=133) Species: 9606 (Homo sapiens) [Search protein sequence]

PQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDE
SSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA
LARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL

3D structure

PDB

8pj1 Structural basis for translational control by the human 48S initiation complex from codon scanning toward subunit joining

Chain

Resolution

3.4 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	P	H32 N38 D39 F41 H43 G49 K50 E51 T52 R55 T57 G59 M60 K63 D65 R66 E68 R98 R104 I135 P136 S137 D138 T140 R141 K143 G144 G145 R146 R147 R149 R150 L151	H14 N20 D21 F23 H25 G31 K32 E33 T34 R37 T39 G41 M42 K45 D47 R48 E50 R80 R86 I117 P118 S119 D120 T122 R123 K125 G126 G127 R128 R129 R131 R132 L133

External links

PDB	RCSB:8pj1, PDBe:8pj1, PDBj:8pj1
PDBsum	8pj1
PubMed
UniProt	P62263\|RS14_HUMAN Small ribosomal subunit protein uS11 (Gene Name=RPS14)