Structure of PDB 8pim Chain P

Receptor sequence
>8pimP (length=162) Species: 562 (Escherichia coli) [Search protein sequence]
MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPL
FPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYK
PKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEI
KHSVKNTEFRKL
3D structure
PDB8pim Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
ChainP
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna P Y8 K10 R11 Q24 R40 T68 N70 A71 T72 R73 G74 V75 Y8 K10 R11 Q24 R40 T68 N70 A71 T72 R73 G74 V75
BS02 dna P R11 G12 V39 R40 K42 R11 G12 V39 R40 K42
Gene Ontology
Molecular Function
GO:0001000 bacterial-type RNA polymerase core enzyme binding
GO:0001073 transcription antitermination factor activity, DNA binding
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008494 translation activator activity
GO:0061980 regulatory RNA binding
Biological Process
GO:0006354 DNA-templated transcription elongation
GO:0006355 regulation of DNA-templated transcription
GO:0031564 transcription antitermination
GO:0045727 positive regulation of translation
GO:0140673 transcription elongation-coupled chromatin remodeling
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pim, PDBe:8pim, PDBj:8pim
PDBsum8pim
PubMed38589445
UniProtP0AFW0|RFAH_ECOLI Transcription antitermination protein RfaH (Gene Name=rfaH)

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