Structure of PDB 8om4 Chain P

Receptor sequence
>8om4P (length=120) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
TCGLVRIRLARFGRKNSPVYNIVVANSRKARDAKPIEVLGTYVPVPSPVT
KRELKRGVVPIKDVKLDFDRTKYWIGVGAQPSETVTKLLRKAGILNDAWA
TSKNSNVNRKVVFERMETLE
3D structure
PDB8om4 METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
ChainP
Resolution2.32 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna P T2 C3 G4 L5 V6 R7 R9 L10 R12 R15 K16 N17 Y21 N27 R29 R32 A34 P47 K52 R53 K63 W75 V78 G79 Q81 S83 T85 K88 K104 T1 C2 G3 L4 V5 R6 R8 L9 R11 R14 K15 N16 Y20 N26 R28 R31 A33 P46 K51 R52 K62 W74 V77 G78 Q80 S82 T84 K87 K103
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8om4, PDBe:8om4, PDBj:8om4
PDBsum8om4
PubMed38199006
UniProtQ02608|RT16_YEAST Small ribosomal subunit protein bS16m (Gene Name=MRPS16)

[Back to BioLiP]