Structure of PDB 8fzi Chain P

Receptor sequence

>8fziP (length=118) Species: 562 (Escherichia coli)

MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEP
LITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKC
GFRAGDNAPMAYIELVDR

3D structure

• PDB: 8fzi The ribosome termination complex remodels release factor RF3 and ejects GDP.
• Chain: P
• Resolution: 3.1 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	P	M1 R2 H3 R4 K5 S6 R8 Q9 N11 R12 S14 H16 R17 I34 T36 K42 E49 T53 V60 R64 F67 R71 E74 A77 R90 A91 G92 G93 R96 K99 R103 G105 D106	M1 R2 H3 R4 K5 S6 R8 Q9 N11 R12 S14 H16 R17 I34 T36 K42 E49 T53 V60 R64 F67 R71 E74 A77 R90 A91 G92 G93 R96 K99 R103 G105 D106

External links

• PDB: RCSB:8fzi, PDBe:8fzi, PDBj:8fzi
• PDBsum: 8fzi
• PubMed: 39030416