Structure of PDB 7syn Chain P

Receptor sequence
>7synP (length=136) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
SLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKAD
RDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSA
LRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
3D structure
PDB7syn Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA
ChainP
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P N38 D39 F41 H43 G49 T52 R55 G59 M60 D65 R66 E68 R98 R104 P136 S137 D138 T140 R141 K143 G144 G145 R146 R147 R149 R150 N23 D24 F26 H28 G34 T37 R40 G44 M45 D50 R51 E53 R83 R89 P121 S122 D123 T125 R126 K128 G129 G130 R131 R132 R134 R135
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7syn, PDBe:7syn, PDBj:7syn
PDBsum7syn
PubMed
UniProtG1T1F0|RS14_RABIT Small ribosomal subunit protein uS11 (Gene Name=RPS14)

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