Structure of PDB 6y3z Chain P

Receptor sequence
>6y3zP (length=348) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
LIVVSIDPMEYIYKPLTHALKKYLPQVEIVSNLPEFDEMKVFHYGDYEQL
DMDKLMELPNNYFTNSYIYRKALIRKHFLSHTIQTYTAKNPESILKKAYL
ESFTIDLDYAEFLDDALDENWELRQELENESQDKWWIVKPSGIRVFKTIE
DLQAIFDSFDDEDSQLRHFIIQEYLTNPLLLASMDNRKFHIRCYVVCRGD
LQVFVYDRMLALFAAKPFVKDSSVLEFDSIEEIPNERKSNIKEQIHSITN
DVFLAAVNVNRLNFQPLPNAFETYGVDFLIDSNYEVKLLEINAFPDFKQT
GKDLKNLIDELFDDTVKYCVTPIFNENRNKTDDETDPNFVKVIDYTSN
3D structure
PDB6y3z Pby1 is a direct partner of the Dcp2 decapping enzyme.
ChainP
Resolution3.49 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 6.3.2.25: tubulin--tyrosine ligase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG P D446 E451 E459 D106 E111 E119
Gene Ontology
Biological Process
GO:0036211 protein modification process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6y3z, PDBe:6y3z, PDBj:6y3z
PDBsum6y3z
PubMed32396195
UniProtP38254|TTL_YEAST Probable tubulin--tyrosine ligase PBY1 (Gene Name=PBY1)

[Back to BioLiP]