Structure of PDB 6r6g Chain P

Receptor sequence

>6r6gP (length=153) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDV
TLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN
AELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT
EKE

3D structure

PDB

6r6g Structural and mutational analysis of the ribosome-arresting human XBP1u.

Chain

Resolution

3.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	P	H133 R135	H132 R134
BS02	rna	P	Y4 R18 S20 L22 H25 F26 K27 N28 R30 Q34 K37 K54 K55 R62 Y63 N64 G65 G66 G68 R69 A71 Q72 K74 Q75 W78 T79 Q80 R82 W83 K85 K86 S100 N101 L104 H116 Q118 V119 K121 K124 R127 T129 Y130 R131 A132 H133 G134 R135 I136 N137 P138 Y139 M140 S141	Y3 R17 S19 L21 H24 F25 K26 N27 R29 Q33 K36 K53 K54 R61 Y62 N63 G64 G65 G67 R68 A70 Q71 K73 Q74 W77 T78 Q79 R81 W82 K84 K85 S99 N100 L103 H115 Q117 V118 K120 K123 R126 T128 Y129 R130 A131 H132 G133 R134 I135 N136 P137 Y138 M139 S140
BS03	rna	P	R3 Y4 S5 R61 R62 W78 K121 P123	R2 Y3 S4 R60 R61 W77 K120 P122

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015934	large ribosomal subunit

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:6r6g, PDBe:6r6g, PDBj:6r6g
PDBsum	6r6g
PubMed	31246176
UniProt	G1SCJ6\|RL17_RABIT Large ribosomal subunit protein uL22 (Gene Name=RPL17)

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