Structure of PDB 6em4 Chain P

Receptor sequence
>6em4P (length=137) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIP
FRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDA
TKLYVSHIQVNQAPKESSPSHIELVVTEKEEAVAKAA
3D structure
PDB6em4 Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
ChainP
Resolution4.1 Å
3D
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P S16 A17 R18 S20 F63 S65 W83 P84 A85 V119 S7 A8 R9 S11 F54 S56 W74 P75 A76 V110
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:0030687 preribosome, large subunit precursor
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6em4, PDBe:6em4, PDBj:6em4
PDBsum6em4
PubMed29245012
UniProtP05740|RL17A_YEAST Large ribosomal subunit protein uL22A (Gene Name=RPL17A)

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