Structure of PDB 3ud3 Chain P

Receptor sequence
>3ud3P (length=87) Species: 9606 (Homo sapiens) [Search protein sequence]
RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF
VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDI
3D structure
PDB3ud3 Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.
ChainP
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P Y13 N15 N16 E19 L49 K50 M51 R52 Q54 F56 K80 Q85 T89 S91 D92 Y7 N9 N10 E13 L43 K44 M45 R46 Q48 F50 K74 Q79 T83 S85 D86
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:3ud3, PDBe:3ud3, PDBj:3ud3
PDBsum3ud3
PubMed22148472
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

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