Structure of PDB 3oto Chain P

Receptor sequence
>3otoP (length=83) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLK
VDVERARYWLSVGAQPTDTARRLLRQAGVFRQE
3D structure
PDB3oto Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function.
ChainP
Resolution3.69 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P M1 K3 R5 L6 F9 K12 H13 H16 Y17 R18 D23 R25 K27 R28 G30 K31 I33 Y38 P41 K43 T44 W59 V62 G63 Q65 T67 T69 R72 R75 F80 R81 Q82 M1 K3 R5 L6 F9 K12 H13 H16 Y17 R18 D23 R25 K27 R28 G30 K31 I33 Y38 P41 K43 T44 W59 V62 G63 Q65 T67 T69 R72 R75 F80 R81 Q82
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:3oto, PDBe:3oto, PDBj:3oto
PDBsum3oto
PubMed20962038
UniProtQ5SJH3|RS16_THET8 Small ribosomal subunit protein bS16 (Gene Name=rpsP)

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