Structure of PDB 3jcd Chain P

Receptor sequence
>3jcdP (length=114) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIR
NRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLR
ERTGKAARIKERLN
3D structure
PDB3jcd EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome
ChainP
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P R38 Q40 G104 K105 R108 R38 Q40 G104 K105 R108
BS02 rna P S1 R20 N51 R52 H55 R92 K93 A94 K95 Y97 Y98 R102 S1 R20 N51 R52 H55 R92 K93 A94 K95 Y97 Y98 R102
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:3jcd, PDBe:3jcd, PDBj:3jcd
PDBsum3jcd
PubMed26809121
UniProtP0A7K6|RL19_ECOLI Large ribosomal subunit protein bL19 (Gene Name=rplS)

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