Structure of PDB 3j9y Chain P

Receptor sequence
>3j9yP (length=114) Species: 562 (Escherichia coli) [Search protein sequence]
SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIR
NRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLR
ERTGKAARIKERLN
3D structure
PDB3j9y Cryo-EM structure of the tetracycline resistance protein TetM in complex with a translating ribosome at 3.9- angstrom resolution.
ChainP
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P R38 K105 R108 R38 K105 R108
BS02 rna P R20 R50 N51 R52 H55 R92 K93 A94 K95 Y97 Y98 R102 R20 R50 N51 R52 H55 R92 K93 A94 K95 Y97 Y98 R102
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:3j9y, PDBe:3j9y, PDBj:3j9y
PDBsum3j9y
PubMed25870267
UniProtP0A7K6|RL19_ECOLI Large ribosomal subunit protein bL19 (Gene Name=rplS)

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