Structure of PDB 3irw Chain P

Receptor sequence
>3irwP (length=90) Species: 9606 (Homo sapiens) [Search protein sequence]
RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF
VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAK
3D structure
PDB3irw Structural basis of ligand binding by a c-di-GMP riboswitch.
ChainP
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna P Y13 N15 N16 E19 K20 S48 L49 K50 M51 R52 G53 Q54 F56 Q85 Y86 K88 D90 S91 D92 Y7 N9 N10 E13 K14 S42 L43 K44 M45 R46 G47 Q48 F50 Q79 Y80 K82 D84 S85 D86 PDBbind-CN: Kd=10pM
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:3irw, PDBe:3irw, PDBj:3irw
PDBsum3irw
PubMed19898477
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

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