Structure of PDB 1pp8 Chain P

Receptor sequence
>1pp8P (length=118) Species: 5722 (Trichomonas vaginalis) [Search protein sequence]
MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQ
LEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKG
GWTQWKRSGFTRNSVFED
3D structure
PDB1pp8 Structural Basis of Core Promoter Recognition in a Primitive Eukaryote
ChainP
Resolution3.05 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna P S26 R33 I78 K79 N81 T82 N86 S26 R33 I78 K79 N81 T82 N86 PDBbind-CN: Kd=190nM
BS02 dna P K25 R28 K69 R88 Q94 D98 K25 R28 K69 R88 Q94 D98 PDBbind-CN: Kd=190nM
External links