Structure of PDB 1nk3 Chain P

Receptor sequence
>1nk3P (length=63) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWF
QNHRYKTKRAQNE
3D structure
PDB1nk3 Interactions of the vnd/NK-2 homeodomain with DNA by nuclear magnetic resonance spectroscopy: basis of binding specificity.
ChainP
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna P R105 V106 F108 Q144 I147 N151 R6 V7 F9 Q45 I48 N52
BS02 dna P R102 K103 R104 R105 Q150 R153 Y154 R3 K4 R5 R6 Q51 R54 Y55
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1nk3, PDBe:1nk3, PDBj:1nk3
PDBsum1nk3
PubMed9154919
UniProtP22808|VND_DROME Homeobox protein vnd (Gene Name=vnd)

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