Structure of PDB 1nfv Chain P

Receptor sequence
>1nfvP (length=170) Species: 876 (Desulfovibrio desulfuricans) [Search protein sequence]
GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLI
AIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDAT
IEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDT
YLAKIAGTPSSTGTASKGFV
3D structure
PDB1nfv The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans
ChainP
Resolution1.95 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.16.3.1: ferroxidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE P E23 E56 H59 E132 E21 E54 H57 E130
BS02 FE P E56 E99 E132 H135 E54 E97 E130 H133
BS03 FEC P R20 M31 Y35 K50 M57 S168 K169 R18 M29 Y33 K48 M55 S166 K167
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0004322 ferroxidase activity
GO:0005506 iron ion binding
GO:0008199 ferric iron binding
GO:0015093 ferrous iron transmembrane transporter activity
GO:0016491 oxidoreductase activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0006826 iron ion transport
GO:0006879 intracellular iron ion homeostasis
GO:0006880 intracellular sequestering of iron ion
GO:0034755 iron ion transmembrane transport
Cellular Component
GO:0005575 cellular_component
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1nfv, PDBe:1nfv, PDBj:1nfv
PDBsum1nfv
PubMed12627224
UniProtQ93PP9|BFR_DESDA Bacterioferritin (Gene Name=bfr)

[Back to BioLiP]