Structure of PDB 8ckb Chain O015

Receptor sequence
>8ckbO015 (length=177) Species: 2301731 (Bacteroides phage crAss001) [Search protein sequence]
MHFNELRISQDNRFLIIDVSVDNQDYFEDVLLDSIVIDTQDTFVMNGPSD
NPLYIYNVEDAYDTQQMKNVRLELNIQDLKVSPCSTMFFVYVKSKGTPST
DTPCGFDKDQILGTVINLQPIYKQTLKYLKEVECDCNIPKGFIDMILKLK
AIELCVRTGNYPQAIKYWNKFFIKNNC
3D structure
PDB8ckb Structural atlas of the most abundant human gut virus
ChainO015
Resolution4.39 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide O015 N46 P48 K120 N46 P48 K93
Gene Ontology
Biological Process
GO:0019058 viral life cycle
GO:0051701 biological process involved in interaction with host
Cellular Component
GO:0044423 virion component

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ckb, PDBe:8ckb, PDBj:8ckb
PDBsum8ckb
PubMed
UniProtA0A385DVT1

[Back to BioLiP]