Structure of PDB 8yhd Chain O

Receptor sequence

>8yhdO (length=190) Species: 256318 (metagenome) [Search protein sequence]

AKTMKKIYVTMKTLSPLYTGEVRREDKEAAQKRVNFPVRKTATNKVLIPF
KGALRSALEIMLKAKGENVCDTRPCGRCVTCSLFGSMGRAGRASVDFLIS
NDTKEQIVRESTHLRIERQTKSASDTFKGEEVIEGATFTATITISNPQEK
DLSLIQSALKFIEENGIGGWLNKGYGRVSFEVKSEDVATD

3D structure

PDB

8yhd Structural basis for the activity of the type VII CRISPR-Cas system.

Chain

Resolution

2.93 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	O	G21 E22 V23 K28 F37 R40 P50 K52 G53 R56 S57 F90 G91 S92 M93 R95 A96 T118 H119 L120 R121 I122 R124 K127 F133 G175 W176 N178	G20 E21 V22 K27 F36 R39 P49 K51 G52 R55 S56 F84 G85 S86 M87 R89 A90 T112 H113 L114 R115 I116 R118 K121 F127 G169 W170 N172
BS02	rna	O	N36 F37 T118 D131 T132 F133 K134	N35 F36 T112 D125 T126 F127 K128
BS03	ZN	O	C81 C84 C87	C75 C78 C81

External links

PDB	RCSB:8yhd, PDBe:8yhd, PDBj:8yhd
PDBsum	8yhd
PubMed	39143216

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