Structure of PDB 8s8j Chain O

Receptor sequence

>8s8jO (length=129) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

DNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPY
AAMLAAQDVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARS
GLRIGRIEDVTPVPSDSTRKKGGRRGRRL

3D structure

PDB

8s8j Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

4.7 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	O	R18 F20 N24 D25 F27 H29 G35 R36 E37 T38 R41 G45 M46 D51 R52 E54 P122 S123 D124 S125 T126 R127 K129 G130 G131 R132 R133 R135 R136	R10 F12 N16 D17 F19 H21 G27 R28 E29 T30 R33 G37 M38 D43 R44 E46 P114 S115 D116 S117 T118 R119 K121 G122 G123 R124 R125 R127 R128

External links

PDB	RCSB:8s8j, PDBe:8s8j, PDBj:8s8j
PDBsum	8s8j
PubMed	39193907
UniProt	P27069\|RS14_KLULA Small ribosomal subunit protein uS11 (Gene Name=RPS14)