Structure of PDB 8s8e Chain O

Receptor sequence
>8s8eO (length=129) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]
DNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPY
AAMLAAQDVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARS
GLRIGRIEDVTPVPSDSTRKKGGRRGRRL
3D structure
PDB8s8e Structural basis of AUC codon discrimination during translation initiation in yeast.
ChainO
Resolution3.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna O R18 N24 D25 F27 H29 G35 R36 E37 T38 R41 T43 G45 M46 D51 R52 P122 S123 D124 S125 T126 R127 K129 G131 R132 R133 R135 R136 R10 N16 D17 F19 H21 G27 R28 E29 T30 R33 T35 G37 M38 D43 R44 P114 S115 D116 S117 T118 R119 K121 G123 R124 R125 R127 R128
External links
PDB RCSB:8s8e, PDBe:8s8e, PDBj:8s8e
PDBsum8s8e
PubMed39193907
UniProtP27069|RS14_KLULA Small ribosomal subunit protein uS11 (Gene Name=RPS14)

[Back to BioLiP]