Structure of PDB 8q5i Chain O

Receptor sequence

>8q5iO (length=150) Species: 5476 (Candida albicans) [Search protein sequence]

GRMHSSGKGISSSALPYSRNAPSWFKLSSDDVVEQIIKYARKGLTPSQIG
VILRDAHGVSQAKVVTGNKILRILKSNGLAPEIPEDLYYLIKKAVSVRKH
LEKNRKDKDSKFRLILIESRIHRLARYYRTVAVLPPNWKYESATASALVA

3D structure

PDB

8q5i Structural characterization of cephaeline binding to the eukaryotic ribosome using Cryo-Electron Microscopy

Chain

Resolution

2.45 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	O	G2 R3 M4 H5 K9 G10 I11 S12 S14 A15 L16 P17 R20 P47 S48 G51 V52 R55 S61 Q62 K64 K70 L72 R73 K76 D87 Y90 K94 S97 V98 H101 N105 K107 D108 K109 D110 K112 F113 R114 I116 L117 S120 R121 R124 Y128	G1 R2 M3 H4 K8 G9 I10 S11 S13 A14 L15 P16 R19 P46 S47 G50 V51 R54 S60 Q61 K63 K69 L71 R72 K75 D86 Y89 K93 S96 V97 H100 N104 K106 D107 K108 D109 K111 F112 R113 I115 L116 S119 R120 R123 Y127

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0070181	small ribosomal subunit rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005730	nucleolus
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:8q5i, PDBe:8q5i, PDBj:8q5i
PDBsum	8q5i
PubMed
UniProt	A0A8H6F4G0

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