Structure of PDB 7yml Chain O

Receptor sequence
>7ymlO (length=56) Species: 1061 (Rhodobacter capsulatus) [Search protein sequence]
MSKFYKIWLVFDPRRVFVAQGVFLFLLAVLIHLILLSTPAFNWLTVATAK
HGYVAA
3D structure
PDB7yml Rhodobacter capsulatus forms a compact crescent-shaped LH1-RC photocomplex.
ChainO
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SPO O F25 H32 L33 F25 H32 L33
BS02 BCL O L24 F25 H32 W43 L24 F25 H32 W43
BS03 SPO O Q20 F23 L24 Q20 F23 L24
BS04 SPO O F4 K6 I7 V10 F4 K6 I7 V10
BS05 BCL O L24 A28 I31 H32 F41 L24 A28 I31 H32 F41
BS06 BCL O F23 I31 F23 I31
Gene Ontology
Molecular Function
GO:0042314 bacteriochlorophyll binding
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872 metal ion binding
Biological Process
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0019866 organelle inner membrane
GO:0030076 light-harvesting complex
GO:0030077 plasma membrane light-harvesting complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7yml, PDBe:7yml, PDBj:7yml
PDBsum7yml
PubMed36792596
UniProtP02948|LHA1_RHOCA Light-harvesting protein B-870 alpha chain (Gene Name=pufA)

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