Structure of PDB 7syp Chain O

Receptor sequence

>7sypO (length=149) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIG
VILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKH
LERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALV

3D structure

PDB

7syp Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.

Chain

Resolution

4.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	O	G2 R3 M4 H5 K9 G10 L11 S12 S14 A15 R20 S48 R55 A61 R64 K70 L72 R73 K76 D87 H90 K94 H101 K107 D110 F113 R114 R121 R124 Y128 K132	G1 R2 M3 H4 K8 G9 L10 S11 S13 A14 R19 S47 R54 A60 R63 K69 L71 R72 K75 D86 H89 K93 H100 K106 D109 F112 R113 R120 R123 Y127 K131

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0070181	small ribosomal subunit rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:7syp, PDBe:7syp, PDBj:7syp
PDBsum	7syp
PubMed	35822879
UniProt	G1SP51\|RS13_RABIT Small ribosomal subunit protein uS15 (Gene Name=RPS13)

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