Structure of PDB 6ny6 Chain O

Receptor sequence
>6ny6O (length=87) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHH
SHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIR
3D structure
PDB6ny6 Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
ChainO
Resolution3.74 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna O P2 K5 K8 D21 T22 G23 S24 Q28 L31 H42 H46 K48 D49 H50 H51 S52 R54 M58 M59 R64 R65 Y69 R72 P1 K4 K7 D20 T21 G22 S23 Q27 L30 H41 H45 K47 D48 H49 H50 S51 R53 M57 M58 R63 R64 Y68 R71
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6ny6, PDBe:6ny6, PDBj:6ny6
PDBsum6ny6
PubMed31501867
UniProtQ5SJ76|RS15_THET8 Small ribosomal subunit protein uS15 (Gene Name=rpsO)

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