Structure of PDB 6iy3 Chain O

Receptor sequence

>6iy3O (length=580) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]

LLDQTKDTRITHLLRQTNAFLDYYNVAHRIKEDIKKQPSILVGGTLKDYQ
IKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLV
IVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLT
TFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLI
LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFDKIELSEEETL
LVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML
KYRRLGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFEL
LDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE
RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDL
QAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKF
DNKSTSEEQEALLRSLLDAEEERRKKRELKDSEINEILARNDEEMAVLTR
MDEDRSKKEEKSRLLEKKREESESAAVYNG

3D structure

PDB

6iy3 Mechanism of DNA translocation underlying chromatin remodelling by Snf2.

Chain

Resolution

3.67 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

3.6.4.-

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	O	R898 K900 N901 S904 K905 N929 I1052 W1185 N1186 R1224	R177 K179 N180 S183 K184 N208 I311 W444 N445 R483
BS02	dna	O	L825 E874 Y875 K878 N1050 M1053 K1057 M1112 T1113 Q1114 G1135 R1142 S1162 G1166	L104 E153 Y154 K157 N309 M312 K316 M371 T372 Q373 G394 R401 S421 G425
BS03	ADP	O	T766 Q771 M794 G795 L796 G797 K798 T799 I800	T45 Q50 M73 G74 L75 G76 K77 T78 I79

Gene Ontology

	Molecular Function
GO:0005524	ATP binding
GO:0042393	histone binding
GO:0140658	ATP-dependent chromatin remodeler activity

View graph for
Molecular Function

External links

PDB	RCSB:6iy3, PDBe:6iy3, PDBj:6iy3
PDBsum	6iy3
PubMed	30867599
UniProt	P22082\|SNF2_YEAST Transcription regulatory protein SNF2 (Gene Name=SNF2)

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