Structure of PDB 6f44 Chain O

Receptor sequence
>6f44O (length=534) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
SLEQRTLNPDLFLYKELVKAHLGERAASVIGMLVALGRLSVRELVEKIDG
MDVDSVKTTLVSLTQLRCVKYLQETAISGKKTTYYYYNEEGIHILLYSGL
IIDEIITQMRVNDEEEHKQLVAEIVQNVISLGSLTVEDYLSSVTSDSMKY
TISSLFVQLCEMGYLIQISKLHYTPIEDLWQFLYEKHYKNIPRNSPLSDL
KKRSQAKMNAKTDFAKIINKPNELSQILTVDPKTSLRIVKPTVSLTINLD
RFMKGRRSKQLINLAKTRVGSVTAQVYKIALRLTEQKSPKIRDPLTQTGL
LQDLEEAKSFQDEAELVEEKTPGLTFNAIDLARHLPSASLINSHLKILAS
SNFPFLNETKPGVYYVPYSKLMPVLKSSVYEYVIASTLGPSAMRLSRCIR
DNKLVSEKIINSTALMKEKDIRSTLASLIRYNSVEIQEVPRTADRSASRA
VFLFRCKETHSYNFMRQNLEWNMANLLFKKEKLKQENSTLLKKANRDDLL
PSELNQLKMVNERELNVFARLSRLLSLWEVFQMA
3D structure
PDB6f44 Molecular mechanism of promoter opening by RNA polymerase III.
ChainO
Resolution4.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna O K520 R561 K408 R449
Gene Ontology
Molecular Function
GO:0001056 RNA polymerase III activity
GO:0003677 DNA binding
GO:0003697 single-stranded DNA binding
GO:0005515 protein binding
Biological Process
GO:0006351 DNA-templated transcription
GO:0006383 transcription by RNA polymerase III
GO:0006384 transcription initiation at RNA polymerase III promoter
GO:0006386 termination of RNA polymerase III transcription
GO:0042797 tRNA transcription by RNA polymerase III
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005666 RNA polymerase III complex
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:6f44, PDBe:6f44, PDBj:6f44
PDBsum6f44
PubMed29345638
UniProtP32349|RPC3_YEAST DNA-directed RNA polymerase III subunit RPC3 (Gene Name=RPC82)

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