Structure of PDB 6cas Chain O

Receptor sequence
>6casO (length=87) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHH
SHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIR
3D structure
PDB6cas Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
ChainO
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna O P2 K8 D21 T22 G23 T25 Q28 L31 R35 H42 H46 K48 D49 H50 H51 S52 H53 R54 G55 M58 R64 R65 Y69 R72 P1 K7 D20 T21 G22 T24 Q27 L30 R34 H41 H45 K47 D48 H49 H50 S51 H52 R53 G54 M57 R63 R64 Y68 R71
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6cas, PDBe:6cas, PDBj:6cas
PDBsum6cas
PubMed30113694
UniProtQ5SJ76|RS15_THET8 Small ribosomal subunit protein uS15 (Gene Name=rpsO)

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