Structure of PDB 5x4z Chain O

Receptor sequence
>5x4zO (length=265) Species: 644223 (Komagataella phaffii GS115) [Search protein sequence]
SKEPKVNIINAQDDEVELMLSDVNLSLANSLRRTMLAEVPTLAIDLVEIK
MNTSVLADEFISHRLGLIPLVSEDVEEMKYSRDCTCEDYCDECSVVLELS
ARHEGETTDVYSSSLIKVSGPGNLNVGEPVRRDDYDQGILLCKLRNHQEL
NIRCIAKKGIAKEHAKWSPCSAIAFEYDPHNKLKHTDFWFEVDAKKEWPD
SKYATWEEPPKPGEVFDYKAKPNRFYMTVETTGSLKANQVFSRGIKTLQE
KLANVLFELENSRPA
3D structure
PDB5x4z Crystal structure of RNA polymerase II from Komagataella pastoris
ChainO
Resolution7.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN O C85 C87 C91 C94 C84 C86 C90 C93
Gene Ontology
Molecular Function
GO:0001055 RNA polymerase II activity
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
Biological Process
GO:0006351 DNA-templated transcription
GO:0006366 transcription by RNA polymerase II
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005665 RNA polymerase II, core complex
GO:0055029 nuclear DNA-directed RNA polymerase complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5x4z, PDBe:5x4z, PDBj:5x4z
PDBsum5x4z
PubMed28412353
UniProtC4R7L2

[Back to BioLiP]