Structure of PDB 3h46 Chain O

Receptor sequence
>3h46O (length=500) Species: 37734 (Enterococcus casseliflavus) [Search protein sequence]
EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANE
IWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAI
VWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGA
QEKADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQ
EILDLLNIPSSMLPEVKSNSEVYGHTRSYEFYGSEVPIAGMAGDQQAALF
GQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYA
LEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGL
GAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI
DIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAV
GFWKDLDELKSMAEEGQMFTPEMPAEERDNLYEGWKQAVAATQTFKFKAK
3D structure
PDB3h46 Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
ChainO
Resolution1.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.1.30: glycerol kinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 GOL O R84 E85 W104 Y136 D246 F271 R82 E83 W102 Y134 D244 F269
Gene Ontology
Molecular Function
GO:0004370 glycerol kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016773 phosphotransferase activity, alcohol group as acceptor
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006071 glycerol metabolic process
GO:0006072 glycerol-3-phosphate metabolic process
GO:0016310 phosphorylation
GO:0019563 glycerol catabolic process
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3h46, PDBe:3h46, PDBj:3h46
PDBsum3h46
PubMed19102629
UniProtO34153|GLPK_ENTCA Glycerol kinase (Gene Name=glpK)

[Back to BioLiP]