Structure of PDB 2hld Chain O

Receptor sequence
>2hldO (length=468) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
TPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGE
NTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDER
GPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLF
GGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGV
INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFID
NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITTTKKGSVTS
VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSR
LLDAAVVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVER
ARKIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHA
FYMVGGIEDVVAKAEKLA
3D structure
PDB2hld Novel features of the rotary catalytic mechanism revealed in the structure of yeast F(1) ATPase.
ChainO
Resolution2.8 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) K163 E189 R190 R356
Catalytic site (residue number reindexed from 1) K157 E183 R184 R350
Enzyme Commision number 7.1.2.2: H(+)-transporting two-sector ATPase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ANP O A159 G160 G162 K163 T164 V165 R190 Y345 A421 F424 A153 G154 G156 K157 T158 V159 R184 Y339 A415 F418
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 proton-transporting ATPase activity, rotational mechanism
Biological Process
GO:0006754 ATP biosynthetic process
GO:0015986 proton motive force-driven ATP synthesis
GO:0042776 proton motive force-driven mitochondrial ATP synthesis
GO:0046034 ATP metabolic process
GO:1902600 proton transmembrane transport
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005758 mitochondrial intermembrane space
GO:0005829 cytosol
GO:0016020 membrane
GO:0045259 proton-transporting ATP synthase complex
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
GO:0045267 proton-transporting ATP synthase, catalytic core

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2hld, PDBe:2hld, PDBj:2hld
PDBsum2hld
PubMed17082766
UniProtP00830|ATPB_YEAST ATP synthase subunit beta, mitochondrial (Gene Name=ATP2)

[Back to BioLiP]